motif-discovery

STUMPY is a powerful and scalable Python library for modern time series analysis

翻译 - STUMPY是一个功能强大且可扩展的Python库，可用于各种时间序列数据挖掘任务

#时序数据库#A Python library for detecting patterns and anomalies in massive datasets using the Matrix Profile

翻译 - 一个使用Matrix Profile检测大型数据集中的模式和异常的Python库

#算法刷题#A Python 3 library making time series data mining tasks, utilizing matrix profile algorithms, accessible to everyone.

golang library for computing matrix profiles along with other time series analysis features

A performant, powerful query framework to search for network motifs

#时序数据库#Motiflets

Fast motif matching in R

#时序数据库#Time-series analysis using the Matrix profile in Julia

pyJASPAR: A Pythonic interface to JASPAR transcription factor motifs

#时序数据库#LoCoMotif is a time series motif discovery method that discovers variable-length motif sets in multivariate time series using time warping

Time Series Motif Detection in Python

A motif discovery tool to detect the occurrences of known motifs

#时序数据库#Classify time series data using motifs discovered from Sequitur processing of SAX discretized data.

Bayesian Markov Model motif discovery tool version 2 - An expectation maximization algorithm for the de novo discovery of enriched motifs as modelled by higher-order Markov models.

#计算机科学#Variational Auto Encoders for learning binding signatures of transcription factors

Yet Another Model Using Neural Networks for Predicting Binding Preferences of for Test DNA Sequences

PEnG-motif is an open-source software package for searching statistically overrepresented motifs (position specific weight matrices, PWMs) in a set of DNA sequences.

Ⓜ️ Tool for motif conservation analysis

An R package for de novo discovery of enriched DNA motifs (e.g. TFBS)

#算法刷题#The matrix profile data structure and associated algorithms for mining time series data