computational-pathology

#计算机科学#Open source tools for computational pathology - Nature BME

#计算机科学#QuPath - Open-source bioimage analysis for research

#计算机科学#Hierarchical Image Pyramid Transformer - CVPR 2022 (Oral)

#计算机科学#Tools for computational pathology

翻译 - 计算病理学工具

Towards a general-purpose foundation model for computational pathology - Nature Medicine

#计算机科学#Computational Pathology Toolbox developed by TIA Centre, University of Warwick.

Tools for tissue image stain normalisation and augmentation in Python 3

A vision-language foundation model for computational pathology - Nature Medicine

#计算机科学#Powerful, open-source AI tools for digital pathology.

HEST: Bringing Spatial Transcriptomics and Histopathology together - NeurIPS 2024 (Spotlight)

Code associated to the publication: Scaling self-supervised learning for histopathology with masked image modeling, A. Filiot et al., MedRxiv (2023). We publicly release Phikon 🚀

#计算机科学#Self-Supervised Vision Transformers Learn Visual Concepts in Histopathology (LMRL Workshop, NeurIPS 2021)

#计算机科学#⚡ Open-source software for deep learning-based digital pathology

Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024

Stain normalization tools for histological analysis and computational pathology

Visual Language Pretrained Multiple Instance Zero-Shot Transfer for Histopathology Images - CVPR 2023

#计算机科学#List of pathology feature extractors and foundation models

#计算机科学#A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.

HistoSegNet: Semantic Segmentation of Histological Tissue Type in Whole Slide Images (ICCV 2019)

[CVPR'23] Histopathology Whole Slide Image Analysis with Heterogeneous Graph Representation Learning