Rapid large-scale prokaryote pan genome analysis
#安卓#SORMAS (Surveillance, Outbreak Response Management and Analysis System) is an early warning and management system to fight the spread of infectious diseases.
翻译 - SORMAS（监视，暴发反应管理和分析系统）是一种预防和控制传染病蔓延的预警和管理系统。
Finds SNP sites from a multi-FASTA alignment file
Mathematical Modeling of Infectious Disease Dynamics
Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation
A tool to circularize genome assemblies
#计算机科学#Unified COVID-19 Dataset
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
Antimicrobial Resistance Identification By Assembly
Get assembly statistics from FASTA and FASTQ files
Infectious Disease Sequencing Platform
Simulation, visualization, and inference of individual level infectious disease models with Julia
Python3 scripts to manipulate FASTA and FASTQ files
Improve the quality of a denovo assembly by scaffolding and gap filling
de novo virus assembler of Illumina paired reads
Simulating epidemics using Python
Domain-Specific Modeling for Epidemiology
Predict plasmids from uncorrected long read data
Multilocus sequence typing by blast using the schemes from PubMLST