Official git repository for Biopython (originally converted from CVS)
翻译 - 用于Biopython的官方git存储库(最初从CVS转换)
#计算机科学#DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
翻译 - DeepVariant是一个分析管道,它使用深度神经网络从下一代DNA测序数据中调用遗传变异。
A versatile pairwise aligner for genomic and spliced nucleotide sequences
翻译 - 用于基因组和剪接核苷酸序列的通用成对比对器
Official code repository for GATK versions 4 and up
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
Data intensive science for everyone.
#计算机科学#A collaboratively written review paper on deep learning, genomics, and precision medicine
翻译 - 有关深度学习,基因组学和精密医学的协作书面评论论文
ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.
Scripts to download genomes from the NCBI FTP servers
Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)
Python library to facilitate genome assembly, annotation, and comparative genomics
Python and C++ code for reading and writing genomics data.
The next version of bwa-mem
翻译 - 下一个版本的bwa-mem(WIP;目前不建议用于生产环境)
Tools to process and analyze deep sequencing data.
A high-performance, Pythonic language for bioinformatics
翻译 - 一种用于生物信息学的高性能Python语言