Python library to facilitate genome assembly, annotation, and comparative genomics
Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs
Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls
KubeGene - A turn-key Genome Sequencing workflow management framework
翻译 - KubeGene-交钥匙的基因组测序工作流程管理框架
Viral genomics analysis pipelines
Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer
A modern genomics framework for julia
H.E.L.E.N. (Homopolymer Encoded Long-read Error-corrector for Nanopore)
Bioinformatics on GCP, AWS or Azure
#Awesome#A collection of publications on comparison of high-throughput sequencing technologies.
Allele-specific copy number estimation with whole genome sequencing
Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data
ChromeQC: Summarize sequencing library quality of 10x Genomics Chromium linked reads
FQSqueezer - FASTQ compressor based on k-mer statistics
This is a pipeline describing how I assembled the complete genome of the freshwater angelfish, Pterophylllum scalare.
A dotplot application for DNA/RNA sequence
Assembled Phi-X174 genome using Overlap Graph, Kmer Composition and De-Bruijn Graph.