MDAnalysis is a Python library to analyze molecular dynamics simulations.
Sample codes for my book on molecular dynamics simulation
Molecular dynamics and Monte Carlo soft matter simulation on GPUs.
Molecular dynamics simulation software
automatic generation of LAMMPS input files for molecular dynamics simulations of MOFs
Monte Carlo and Molecular Dynamics Simulation Package
Neural relational inference for molecular dynamics simulations
an automatic reaction network generator for reactive molecular dynamics simulation
Graphics Processing Units Molecular Dynamics
Deep learning meets molecular dynamics.
molecular dynamics simulation and analysis. 分子动力学模拟和分析。
Molecular simulation in Julia
Universal extensible molecular simulation engine