MDAnalysis is a Python library to analyze molecular dynamics simulations.
User Guide for MDAnalysis
MDAnalysis home page mdanalysis.org as GitHub pages.
The MDAnalysis Toolkits Registry
MDAnalysis wrapper around Packmol
Examples and tutorials of using MDAnalysis
MDAnalysis tool to calculate membrane curvature.
testing reporsitory for workshops
Reads Gromacs EDR file to populate a pandas dataframe
GridDataFormats is a pure Python library to handle data on a regular grid using commonly used file formats in molecular simulations.